Computational Glioscience

Voorkant
Maurizio De Pittà, Hugues Berry
Springer, 21 jan 2019 - 505 pagina's
Over the last two decades, the recognition that astrocytes - the predominant type of cortical glial cells - could sense neighboring neuronal activity and release neuroactive agents, has been instrumental in the uncovering of many roles that these cells could play in brain processing and the storage of information. These findings initiated a conceptual revolution that leads to rethinking how brain communication works since they imply that information travels and is processed not just in the neuronal circuitry but in an expanded neuron-glial network. On the other hand the physiological need for astrocyte signaling in brain information processing and the modes of action of these cells in computational tasks remain largely undefined. This is due, to a large extent, both to the lack of conclusive experimental evidence, and to a substantial lack of a theoretical framework to address modeling and characterization of the many possible astrocyte functions. This book that we propose aims at filling this gap, providing the first systematic computational approach to the complex, wide subject of neuron-glia interactions. The organization of the book is unique insofar as it considers a selection of “hot topics” in glia research that ideally brings together both the novelty of the recent experimental findings in the field and the modelling challenge that they bear. A chapter written by experimentalists, possibly in collaboration with theoreticians, will introduce each topic. The aim of this chapter, that we foresee less technical in its style than in conventional reviews, will be to provide a review as clear as possible, of what is “established” and what remains speculative (i.e. the open questions). Each topic will then be presented in its possible different aspects, by 2-3 chapters by theoreticians. These chapters will be edited in order to provide a “priming” reference for modeling neuron-glia interactions, suitable both for the graduate student and the professional researcher.
 

Inhoudsopgave

1 A NeuronGlial Perspective for Computational Neuroscience
3
Calcium Dynamics
38
2 DataDriven Modelling of the Inositol Trisphosphate Receptor IP3R and its Role in CalciumInduced Calcium Release CICR
39
Biophysical and Simplified Models
69
4 Modeling of Stochastic Ca2+ Signals
91
5 G ProteinCoupled ReceptorMediated Calcium Signaling in Astrocytes
115
6 Emergence of Regular and Complex Calcium Oscillations by Inositol 145Trisphosphate Signaling in Astrocytes
151
7 Astrocyte Networks and Intercellular Calcium Propagation
177
11 Computational Models of Pathophysiological Glial Activation in CNS Disorders
289
Homeostasis and Metabolic Coupling
308
12 The Role of Astrocytes in Neurotransmitter Uptake and Brain Metabolism
309
13 Glutamate Uptake by Astrocytic Transporters
329
Implications for Potassium Buffering and Liquid Flow
363
15 ConstraintBased Modeling of Metabolic Interactions in and Between Astrocytes and Neurons
393
Computational Tools to Analyze and Model Astrocyte Experiments
421
Characterization Reproducibility and Future Perspectives
423

Tripartite Synapse and Regulation of Network Activity
211
8 Gliotransmission at Tripartite Synapses
213
9 Purinergic Signaling at Tripartite Synapses
227
10 Gliotransmitter Exocytosis and Its Consequences on Synaptic Transmission
245
Semiautomated Detection and Quantification of Astrocyte Intracellular Ca2+ Signals Monitored with GCaMP6f
455
18 Modeling NeuronGlia Interactions with the Brian 2 Simulator
471
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